Module sbaconverter

The module provides class necessary to translate data from ScalableBrainAtlas to CAF dataset.

Import Graph

Classes

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barSBAParser
Generic class for translating data from ScalableBrainAtlas to CAF dataset.

Functions

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str

cleanStructName(structName)
Provided acronyms are usually fine but sometimes they are not compatibile with 3dBar naming convention.

Variables

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STRUCTURE_NAME_TEMPLATE = 'structure%d_label%d_%s'

__package__ = 'bar'

Function Details

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cleanStructName(structName)

Provided acronyms are usually fine but sometimes they are not compatibile with 3dBar naming convention. Here we process them so they can pass 3dBAR name validataion.

Parameters:

structName (str) - initial sturcture name, potentially invalid

Returns: str

structure name transformed in the way that passes 3dBAR name validation