\select@language {english}
\contentsline {chapter}{\numberline {1}3d Brain Atlas Reconstructor readme file}{3}{chapter.1}
\contentsline {section}{\numberline {1.1}Installing required packages (Ubuntu)}{3}{section.1.1}
\contentsline {section}{\numberline {1.2}Generating CAF datasets}{4}{section.1.2}
\contentsline {section}{\numberline {1.3}Generating 3-D models}{5}{section.1.3}
\contentsline {section}{\numberline {1.4}Generating documentation}{6}{section.1.4}
\contentsline {chapter}{\numberline {2}Basics of CAF datasets}{7}{chapter.2}
\contentsline {section}{\numberline {2.1}Basics of CAF slide}{7}{section.2.1}
\contentsline {subsection}{\numberline {2.1.1}Creating empty CAF slide}{7}{subsection.2.1.1}
\contentsline {subsection}{\numberline {2.1.2}Creating delineations of brain regions}{7}{subsection.2.1.2}
\contentsline {subsubsection}{Path id convention}{8}{subsubsection*.3}
\contentsline {subsubsection}{Additional properties}{8}{subsubsection*.4}
\contentsline {subsubsection}{Cusomizing paths}{8}{subsubsection*.5}
\contentsline {subsection}{\numberline {2.1.3}Adding labels}{8}{subsection.2.1.3}
\contentsline {subsubsection}{Automatic label generation}{8}{subsubsection*.6}
\contentsline {subsection}{\numberline {2.1.4}Adding information about spatial coordinate system}{8}{subsection.2.1.4}
\contentsline {subsection}{\numberline {2.1.5}Putting pieces togeater}{8}{subsection.2.1.5}
\contentsline {chapter}{\numberline {3}CAF tests: \texttt {crisp-edges} property}{11}{chapter.3}
\contentsline {section}{\numberline {3.1}Tests}{11}{section.3.1}
\contentsline {chapter}{\numberline {4}CAF tests: \texttt {type} property (barGenericStructure, barPath)}{13}{chapter.4}
\contentsline {section}{\numberline {4.1}Tests}{13}{section.4.1}
\contentsline {chapter}{\numberline {5}CAF API tests: \texttt {size} and \texttt {bitmapSize} property}{15}{chapter.5}
\contentsline {chapter}{\numberline {6}CAF API tests: \texttt {barMarker} class and its subclasses}{17}{chapter.6}
\contentsline {chapter}{\numberline {7}Indices and tables}{21}{chapter.7}